Home - Software
I am a member of the Bioconductor project.
Here are some other R packages that I co-author.
** sydSeq [ Analysis tools for RNA-seq data] [tar.gz] [zip]
Statistics for Microarray Analysis (sma).
Spot - an image analysis package.
Notes: for more information about analysis and software please see the UCSF Functional Genomics Core Facilities Analysis site.
Here is some software I use:
|R , also known as "GNU S", is a freely available system for statistical computation and graphics.|
|Z-Image , an image analysis system developed by the image analysis group at CSIRO, Australia. SZ-Image provides the image analysis functionality of Z-Image within the data analysis environment of S-Plus.|
|Matlab, an easy-to-use computing and visualization environment, which integrates numerical analysis, matrix computation, signal processing, and graphics.|
|S-Plus , a language for data visualization and exploration, statistical modeling and programming.|