Publication search results
Matches for:- Author=Yang YH
2. Lewis CC, Yang YH, Huang X, Banerjee SK, Blackburn MR, Baluk P, McDonald DM, Blackwell TS, Nagabhushanam V, Peters W, Voehringer D, Erle DJ. Disease-specific gene expression profiling in multiple models of lung disease., American journal of respiratory and critical care medicine, 177 (2008), no. 4, 376–387.
3. Winn VD, Haimov-Kochman R, Paquet AC, Yang YH, Madhusudhan MS, Gormley M, Feng KT, Bernlohr DA, McDonagh S, Pereira L, Sali A, Fisher SJ. Gene expression profiling of the human maternal-fetal interface reveals dramatic changes between midgestation and term., Endocrinology, 148 (2007), no. 3, 1059–79.
4. Xiao YY, Segal M, Yang YH, Yeh RF. A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarray., Bioinformatics, 23 (2007), no. 12, 1459–1467.
5. Williams E, Xiao Y, Sickles H, Shafer P, Yona G, Yang YH, Lin F. Novel subdomains of the mouse olfactory bulb defined by molecular heterogeneity in the nascent external plexiform and glomerular, BMC Development Biology, 7 (2007), no. 48, 1. MR2339061
6. Woodruff PG, Boushey HA, Dolganov GM, Barker CS, Yang YH. Genome-wide profiling identifies epithelial cell genes associated with asthma and with treatment response to corticosteroids, PNAS, 104 (2007), no. 40, 15858–15863.
7. Yang YH, Xiao YY, Segal M. Identifying differentially expressed genes from microarray experiments via statistic synthesis., Bioinformatics, 21 (2005), 1084–1093.
8. Gonzalez R, Yang YH, Griffin C, Allen L, Tigue Z, Dobbs L. Freshly isolated Rat Alveolar Type I Cells, Type II Cells, and Cultured Type II Cells Have Distinct Molecular Phenotypes., Am J Physiol Lung Cell Mol Physiol., 288 (2005), no. 1, L179–89.
9. Xiao YY, Segal M, Yang YH. Stepwise Normalization of Two-Channel Spotted Microarrays., Statistical Applications in Genetics and Molecular Biolog,, 4 (2005), Article 4. MR2353349
10. Barker C, Griffin C, Dolganov G, Hanspers K, Yang YH, Erle DJ. Increase DNA hybridization specificity using sscDNA targets., BMC Genomics, 6 (2005), no. 1, 57.
11. Kuperman DA, Lewis CC, Woodruff PG, Rodriguez MW, Yang YH, Dolganov GM, Fahy JV, Erle DJ. Dissecting asthma using focused transgenic modeling and functional genomics., J Allergy Clin Immunol., 116 (2005), no. 2, 305–311.
12. Xiao Y, Yang YH, Burckin TA, Shiue L, Hartzog GA, Segal MR. analysis of a Splice Array Experiment Elucidates Roles of Chromatin Elongation Factor Spt4-5 in Splicing, PLoS Comput Biol., 1 (2005), no. 4, e39. MR0627528
13. Woodruff PG, Koth LL, Yang YH, Rodriguez MW, Favoreto S, Dolganov GM, Paquet AC, Erle DJ. A distinctive alveolar macrophage activation state induced by cigarette smoking, Am J Respir Crit Care Med,, 172 (2005), 1383–1392.
14. Rodriguez MW, Paquet AC, Yang YH, Erle DJ. Differential gene expression by integrin beta7+and beta7-memory T helper cells., BMC Immunology, NA (2004), 5–13.
15. Lin D, Yang YH, Scolnick J, Brunet L, Marsh M, Peng V, Okazaki Y. Spatial patterns of gene expression in the olfactory bulb., PNAS,, 101 (2004), no. 34, 12718–12723.
16. Diaz E, Yang YH, Loh KC, Tessier-Lavigne M, Speed TP, Ngai J. Molecular analysis of positional identity in the developing mouse retina., PNAS, 100 (2003), no. 9, 5491–5496.
17. Erle DJ, Yang YH. Asthma investigators begin to reap the fruits of genomics., Genome Biology,, 4 (2003), no. 11, 232. MR2311406
18. Yang YH, Speed TP. Design and Analysis of Comparative Microarray Experiments, Statistical Analysis of Gene Expression Microarray Data,, Chapman & Hall., New York, (2003), 35–92. ISBN 1-58488-327-8
19. Yang YH, Dudoit S, Luu P, Lin DM, Peng V, Ngai J, Speed TP. Normalization for cDNA microarray data: a composite method addressing local, global and multiple slide systematic variation., Nucleic Acid Research, 30 (2002), no. 4, E15. MR0959586
20. Yang YH, Dudoit S, Callow MJ, Speed TP. Statistical methods for identifying differentially expressed genes in replicated cDNA microarray experiments., Statistica Sinica, 12 (2002), 111–139. MR1894191
21. Yang YH, Buckley MJ, Dudoit S, Speed TP. Comparison of methods for image analysis on cDNA microarray data, Journal of Computational and Graphical Statistics, 11 (2002), 108–136. MR1963244
22. Speed TP, Yang YH. Direct versus indirect designs for cDNA microarray experiments., Sankhya Series A,, 64 (2002), no. Series A, Pt 3, 706–720.
23. Yang YH, Speed TP. Design issues for cDNA microarray experiments., Nature Review Genetics, 3 (2002), 579–558.
24. Diaz E, Ge Y, Yang YH, Loh KC, Serafini TA, Okazaki Y, Hayashizaki Y, Speed TP, Ngai J, Scheiffele P. Molecular Analysis of Gene Expression in the Developing Pontocerebellar Projection System., Neuron, 36 (2002), no. 3, 417–434.
25. Ball CA, Chen Y, Panavally S, Sherlock G, Speed TP, Spellman PT, Yang YH. Section7: An introduction to microarray bioinformatics., DNA Microarrays: A Molecular Cloning Manual., Cold Spring Harbor Press, Cold Spring Harbor, New York, (2002), 509–602. ISBN 0-87969-625-7
26. Yang YH, Buckley MJ, Speed TP. Analysis of cDNA microarray images., Briefings in Bioinformatics,, 2 (2001), 341–349.
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